PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.K6CZL
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 329aa    MW: 37289.3 Da    PI: 7.1114
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.K6CZLgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.31.2e-12124167855
                  HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                   Er RR+++++ f++L  +lP++     +K +K++i+ +Av++Ik Lq
  Araip.K6CZL 124 TERERRKKMRDMFANLHAMLPQL----PPKADKSSIVDEAVRHIKTLQ 167
                  6*********************6....39******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088813.535116166IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474595.1E-15119187IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.9E-14121182IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000838.08E-12121171No hitNo description
PfamPF000104.9E-10124167IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.1E-8124172IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009793Biological Processembryo development ending in seed dormancy
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 329 aa     Download sequence    Send to blast
KFLTITLSLS PPTHIDTLSS LSLTMAMSVE NQDPNDIGFF WDNQPWDVSN FDNLGQRETK  60
ENLHIEMPPL PPAPTNHLTQ GEIEKKNEEL TMPVTSNKKR RRADEDGKRP MKNDGNDHDL  120
HIWTERERRK KMRDMFANLH AMLPQLPPKA DKSSIVDEAV RHIKTLQQTV ENLEKKKRQR  180
IQSLSVSVSP IACESAVTNP QWNPYDSSSL SRDNNALTIT ATQHVSAAVA NNSPFFKTWA  240
SQNVVLNMCG EEAQFSICAE KKPSLFTTIA FVLQKHKVDV ISASILCNHN VNRYMVLTHA  300
SRALLQFADA NTVEETFKRA AEEIMMWLG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1174179KKKRQR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016178303.10.0PREDICTED: transcription factor bHLH95
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF47733358
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49770.12e-48bHLH family protein